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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015830790.1_cds_XP_016504290.1_17749
CDS Infomation

[gene=LOC107822278] [db_xref=GeneID:107822278] [protein=beta-carotene hydroxylase 2, chloroplastic-like] [protein_id=XP_016504290.1] [location=complement(join(3391..3468,3616..3672,3813..3938,4146..4280,4415..4486,4819..4878,4967..5368))] [gbkey=CDS]
Sequence

ATGGCCGCCAGCAGAATTTCCTTTACTTCCAGCTCTCAAACCATTTATTTCCGTCACGGC
CCGTTTCTATGCCCAAATCCGGTTTTCCCAATCTCTTCCTTTTCTCGTAATCTTGGCACA
ATTCTGAGGTCTAGAAGAAAACCCAGTTTCACAGTTTGCTTTGTTCTGGAGGATGAGAAG
TTGAATACTCTATTTGACAAGTTGAATGCTCAATTAGAAACTGGGACAGAGGAGATTGAA
ATGAAAATTGAGGAGCAGATCTCAGCGACTCGTTTAGCGGAAAAATTGGCTAGGAAAAAA
TCGGAGAGGTTTACTTATCTTGTGGCTGCGGTTATGTCTAGTTTTGGGATTACTTCCTTG
GCTATTATGGCCGTCTATTACAGATTTTCGTGGCAAATGGAGGGTGGAGAAGTGCCTTTA
ACTGAAATGTTTGGTACATTTGCTCTCTCAGTTGGTGCTGCTGTAGGAATGGAGTTTTGG
GCAAGGTGGGCTCATAGAGCGCTTTGGCACGATTCTCTTTGGCACATGCACGAGTCACAC
CATAAACCAAGAGAAGGACCTTTCGAGATGAACGATGTGTTTGCCATAATCAACGCCGTT
CCAGCAATAGCCCTCCTCAACTATGGTTTCTTCCATAAAGGCCTCATTCCTGGCCTCTGC
TTCGGCGCTGGGCTAGGGATCACAGTATTTGGGATGGCTTACATGTTCGTTCACGATGGT
TTGGTTCACAAGAGATTCCCCGTCGGACCTGTAGCCAATGTACCTTATTTTAGGAAGGTG
GCCGCAGCTCATTTGCTCCATCACTCAGAGAAGTTCAATGGTGTCCCATATGGTTTGTTC
TTGGGACCAAAGGAATTGGAAGAAGTAGGGGGGATTGAAGAATTGGAAAAGGAAGTGAAC
CGAAGGATAAAACTTTCCAGGGGATCATGA

Peptide Sequence

PEP ID

XP_016504290.1
PEP Infomation

PREDICTED: beta-carotene hydroxylase 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MAASRISFTSSSQTIYFRHGPFLCPNPVFPISSFSRNLGTILRSRRKPSFTVCFVLEDEK
LNTLFDKLNAQLETGTEEIEMKIEEQISATRLAEKLARKKSERFTYLVAAVMSSFGITSL
AIMAVYYRFSWQMEGGEVPLTEMFGTFALSVGAAVGMEFWARWAHRALWHDSLWHMHESH
HKPREGPFEMNDVFAIINAVPAIALLNYGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDG
LVHKRFPVGPVANVPYFRKVAAAHLLHHSEKFNGVPYGLFLGPKELEEVGGIEELEKEVN
RRIKLSRGS

Transcript Sequence

Gene sequence data has not been registered.